Publications of Timo Glatter

Laventie, B.-J.; Nesper, J.; Ahrne, E.; Glatter, T.; Schmidt, A.; Jenal, U.: Capture Compound Mass Spectrometry - A Powerful Tool to Identify Novel c-di-GMP Effector Proteins. JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (97), e51404 (2015)

Bauer, M.; Ahrne, E.; Baron, A. P.; Glatter, T.; Fava, L. L.; Santamaria, A.; Nigg, E. A.; Schmidt, A.: Evaluation of Data-Dependent and -Independent Mass Spectrometric Workflows for Sensitive Quantification of Proteins and Phosphorylation Sites. JOURNAL OF PROTEOME RESEARCH 13 (12), pp. 5973 - 5988 (2014)

Maze, A.; Glatter, T.; Bumann, D.: The Central Metabolism Regulator EIIA(Glc) Switches Salmonella from Growth Arrest to Acute Virulence through Activation of Virulence Factor Secretion. CELL REPORTS 7 (5), pp. 1426 - 1433 (2014)

Pieles, K.; Glatter, T.; Harms, A.; Schmidt, A.; Dehio, C.: An experimental strategy for the identification of AMPylation targets from complex protein samples. PROTEOMICS 14 (9), pp. 1048 - 1052 (2014)

Ahrne, E.; Molzahn, L.; Glatter, T.; Schmidt, A.: Critical assessment of proteome-wide label-free absolute abundance estimation strategies. PROTEOMICS 13 (17), pp. 2567 - 2578 (2013)

Berti, M.; Chaudhuri, A. R.; Thangavel, S.; Gomathinayagam, S.; Kenig, S.; Vujanovic, M.; Odreman, F.; Glatter, T.; Graziano, S.; Mendoza-Maldonado, R. et al.; Marino, F.; Lucic, B.; Biasin, V.; Gstaiger, M.; Aebersold, R.; Sidorova, J. M.; Monnat Jr., R. J.; Lopes, M.; Vindigni, A.: Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition. NATURE STRUCTURAL & MOLECULAR BIOLOGY 20 (3), pp. 347 - 354 (2013)

Choi, H.; Glatter, T.; Gstaiger, M.; Nesyizhskii, A. I.: SAINT-MS1: Protein-Protein Interaction Scoring Using Label-free Intensity Data in Affinity Purification-Mass Spectrometry Experiments. JOURNAL OF PROTEOME RESEARCH 11 (4), pp. 2619 - 2624 (2012)

Glatter, T.; Ludwig, C.; Ahrne, E.; Aebersold, R.; Heck, A. J. R.; Schmidt, A.: Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion. JOURNAL OF PROTEOME RESEARCH 11 (11), pp. 5145 - 5156 (2012)

Nesper, J.; Reinders, A.; Glatter, T.; Schmidt, A.; Jenal, U.: A novel capture compound for the identification and analysis of cyclic di-GMP binding proteins. JOURNAL OF PROTEOMICS 75 (15), pp. 4874 - 4878 (2012)

Glatter, T.; Schittenhelm, R. B.; Rinner, O.; Roguska, K.; Wepf, A.; Juenger, M. A.; Koehler, K.; Jevtov, I.; Choi, H.; Schmidt, A. et al.; Nesvizhskii, A. I.; Stocker, H.; Hafen, E.; Aebersold, R.; Gstaiger, M.: Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. MOLECULAR SYSTEMS BIOLOGY 7, 547 (2011)

Iijima, T.; Wu, K.; Witte, H.; Hanno-Iijima, Y.; Glatter, T.; Richard, S.; Scheiffele, P.: SAM68 Regulates Neuronal Activity-Dependent Alternative Splicing of Neurexin-1. CELL 147 (7), pp. 1601 - 1614 (2011)

Ritz, D.; Vuk, M.; Kirchner, P.; Bug, M.; Schuetz, S.; Hayer, A.; Bremer, S.; Lusk, C.; Baloh, R. H.; Lee, H. et al.; Glatter, T.; Gstaiger, M.; Aebersold, R.; Weihl, C. C.; Meyer, H.: Endolysosomal sorting of ubiquitylated caveolin-1 is regulated by VCP and UBXD1 and impaired by VCP disease mutations. NATURE CELL BIOLOGY 13 (9), pp. 1116 - U148 (2011)

Glatter, T.; Wepf, A.; Aebersold, R.; Gstaiger, M.: An integrated workflow for charting the human interaction proteome: insights into the PP2A system. MOLECULAR SYSTEMS BIOLOGY 5, 237 (2009)

Habjan, M.; Pichlmair, A.; Elliott, R. M.; Oeverby, A. K.; Glatter, T.; Gstaiger, M.; Superti-Furga, G.; Unger, H.; Weber, F.: NSs Protein of Rift Valley Fever Virus Induces the Specific Degradation of the Double-Stranded RNA-Dependent Protein Kinase. JOURNAL OF VIROLOGY 83 (9), pp. 4365 - 4375 (2009)

Theis, M.; Slabicki, M.; Junqueira, M.; Paszkowski-Rogacz, M.; Sontheimer, J.; Kittler, R.; Heninger, A.-K.; Glatter, T.; Kruusmaa, K.; Poser, I. et al.; Hyman, A. A.; Pisabarro, M. T.; Gstaiger, M.; Aebersold, R.; Shevchenko, A.; Buchholz, F.: Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division. EMBO JOURNAL 28 (10), pp. 1453 - 1465 (2009)

Wepf, A.; Glatter, T.; Schmidt, A.; Aebersold, R.; Gstaiger, M.: Quantitative interaction proteomics using mass spectrometry. NATURE METHODS 6 (3), pp. 203 - 205 (2009)

Lampaki, D.; Diepold, A.; Glatter, T.: In-depth quantitative proteomics analysis of the Pseudomonas aeruginosa secretome. In: Pseudomonas aeruginosa. Methods in Molecular Biology, Vol. 2721, pp. 197 - 211 (Ed. Bertoni, G.) (2024)

Lampaki, D.; Diepold, A.; Glatter, T.: In-depth quantitative proteomics analysis of the Pseudomonas aeruginosa secretome. In: Pseudomonas aeruginosa: Methods and Protocols in Methods in Molecular Biology, Vol. 2721, pp. 197 - 211 (Eds. Bertoni, G.; Ferrara, S.). Humana New York, NY (2023)

Laventie, B.-J.; Glatter, T.; Jenal, U.: Pull-Down with a c-di-GMP-Specific Capture Compound Coupled to Mass Spectrometry as a Powerful Tool to Identify Novel Effector Proteins. In: C-DI-GMP SIGNALING: Methods and Protocols, pp. 361 - 376 (2017)

Jung, J.; Glatter, T.; Herfurth, M.; Søgaard-Andersen, L.: DdiA, an XRE family transcriptional regulator, regulates a LexA-independent DNA damage response in Myxococcus xanthus. bioRxiv: the preprint server for biology, 2025.02.19.639066 (2025)