Publications of Helge B. Bode

Pandi, Amir, Adam, David, Zare, Amir, Trinh, Van Tuan, Schaefer, Stefan L., Burt, Marie, Klabunde, Björn, Bobkova, Elizaveta, Kushwaha, Manish, Foroughijabbari, Yeganeh, Braun, Peter, Spahn, Christoph Klaus, Preußer, Christian, Pogge von Strandmann, Elke, Bode, Helge B., von Buttlar, Heiner, Bertrams, Wilhelm, Jung, Anna Lena, Abendroth, Frank, Schmeck, Bernd, Hummer, Gerhard, Vázquez, Olalla and Erb, Tobias J.: (2023) Cell-free biosynthesis combined with deep learning accelerates de novo-development of antimicrobial peptides, Nature Communications, London, Nature Publishing Group, 14 (1).

Kavakli, Siyar, Grammbitter, Gina L. C. and Bode, Helge B.: (2022) Biosynthesis of the multifunctional isopropylstilbene in Photorhabdus laumondii involves cross-talk between specialized and primary metabolism, Tetrahedron, Kidlington, Elsevier Science, 128, December.

Shi, Y.-M., Crames, J. J., Czech, L., Bozhüyük, K. A. J., Shi, Y.-N., Hirschmann, M., Lamberth, S., Claus, P., Paczia, N., Ruckert, C., Kalinowski, J., Bange, G. and Bode, H. B.: (2022) Genome mining enabled by biosynthetic characterization uncovers a class of benzoxazolinate-containing natural products in diverse bacteria, Angewandte Chemie, International Edition in English, Weinheim, Wiley-VCH, 61 (51).

Muangpat, P., Meesil, W., Ngoenkam, J., Teethaisong, Y., Thummeepak, R., Sitthisak, S., Tandhavanant, S., Chantratita, N., Bode, H. B., Vitta, A. and Thanwisai, A.: (2022) Genome analysis of secondary metabolitebiosynthetic gene clusters of Photorhabdus akhurstii subsp. akhurstii and its antibacterial activity against antibiotic-resistant bacteria, PLOS ONE, San Francisco, CA, Public Library of Science, 17 (9).

Shi, Y.-M., Hirschmann, M., Shi, Y.-N. and Bode, H. B.: (2022) Cleavage off-loading and post-assembly-line conversions yield products with unusual termini during biosynthesis, ACS Chemical Biology, Washington, D.C., American Chemical Society, 17 (8), pp. 2221–2228.

Ahmed, S., Tafim Hossain Hrithik, M., Chandra Roy, M., Bode, H. B. and Kim, Y.: (2022) Phurealipids, produced by the entomopathogenic bacteria, Photorhabdus, mimic juvenile hormone to suppress insect immunity and immature development, Journal of Invertebrate Pathology, New York, Academic Press, 193, July.

Gulsen, S. H., Tileklioglu, E., Bode, E., Cimen, H., Ertabaklar, H., Ulug, D., Ertug, S., Wenski, S. L., Touray, M., Hazir, C., Bilecenoglu, D. K., Yildiz, I., Bode, H. B. and Hazir, S.: (2022) Antiprotozoal activity of different Xenorhabdus and Photorhabdus bacterial secondary metabolites and identification of bioactive compounds using the easyPACId approach, Scientific Reports, London, UK, Nature Publishing Group, 12 (1).

Abbood, Nadya, Vo, Tien Duy, Watzel, Jonas, Bozhueyuek, Kenan A. J. and Bode, Helge B.: (2022) Type S non-ribosomal peptide synthetases for the rapid generation of tailormade peptide libraries, Chemistry – A European Journal, Weinheim, Wiley-VCH, 28 (26).

Shi, Y.-M., Hirschmann, M., Shi, Y.-N., Ahmed, S., Abebew, D., Tobias, N. J., Grun, P., Crames, J. J., Pöschel, L., Kuttenlochner, W., Richter, C., Herrmann, J., Muller, R., Thanwisai, A., Pidot, S. J., Stinear, T. P., Groll, M., Kim, Y. and Bode, H. B.: (2022) Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria, Nature Chemistry, London, UK, Nature Publishing Group, 14, April, pp. 701–712.

Sarawi, Sepas, Shi, Yan-Ni, Lotz-Winter, Hermine, Reschke, Kai, Bode, Helge B. and Piepenbring, Meike: (2022) Occurrence and chemotaxonomical analysis of amatoxins in Lepiota spp. (Agaricales), Phytochemistry, Amsterdam, Elsevier, 195, March.

Abebew, Desalegne, Sayedain, Fatemeh, Bode, Edna and Bode, Helge B.: (2022) Uncovering nematicidal natural products from Xenorhabdus bacteria, Journal of Agricultural and Food Chemistry, Easton, Pa., American Chemical Society, Books and Journals Division, 70 (2), pp. 498–506.

Gerke, Jennifer, Köhler, Anna M., Wennrich, Jan-Peer, Große, Verena, Shao, Lulu, Heinrich, Antje K., Bode, Helge B., Chen, Wanping, Surup, Frank and Braus, Gerhard H.: (2022) Biosynthesis of antibacterial iron-chelating tropolones in Aspergillus nidulans as response to glycopeptide-producing Streptomycetes, Frontiers in Fungal Biology, Switzerland, Frontiers Media S.A., 2, January.

Zolfaghariyan, Sahar, Shakeri, Abolfazl, Asili, Javad, Tarighi, Saeed, Grün, Peter, Shi, Yi-Ming, Bode, Helge B. and Karimi, Javad: (2022) Cyclic depsipeptides and linear peptides with cytotoxic and antiphytopathogenic activities from symbiotic bacteria of Xenorhabdus (Enterobacteriales: Morganellaceae) genus, Annals of the Entomological Society of America, College Park, Md., Entomological Society of America, 116 (2), pp. 114–124.

Miethke, Marcus, Pieroni, Marco, Weber, Tilmann, Bronstrup, Mark, Hammann, Peter, Halby, Ludovic, Arimondo, Paola B., Glaser, Philippe, Aigle, Bertrand, Bode, Helge B., Moreira, Rui, Li, Yanyan, Luzhetskyy, Andriy, Medema, Marnix H., Pernodet, Jean-Luc, Stadler, Marc, Tormo, Jose Ruben, Genilloud, Olga, Truman, Andrew W., Weissman, Kira J., Takano, Eriko, Sabatini, Stefano, Stegmann, Evi, Brotz-Oesterhelt, Heike, Wohlleben, Wolfgang, Seemann, Myriam, Empting, Martin, Hirsch, Anna K. H., Loretz, Brigitta, Lehr, Claus-Michael, Titz, Alexander, Herrmann, Jennifer, Jaeger, Timo, Alt, Silke, Hesterkamp, Thomas, Winterhalter, Mathias, Schiefer, Andrea, Pfarr, Kenneth, Hoerauf, Achim, Graz, Heather, Graz, Michael, Lindvall, Mika, Ramurthy, Savithri, Karlen, Anders, van Dongen, Maarten, Petkovic, Hrvoje, Keller, Andreas, Peyrane, Frederic, Donadio, Stefano, Fraisse, Laurent, Piddock, Laura J. V., Gilbert, Ian H., Moser, Heinz E. and Muller, Rolf: (2021) Towards the sustainable discovery and development of new antibiotics, Nature Reviews Chemistry, London, Nature Publishing Group, 5 (10), pp. 726–749.

Erkoc, Pelin, Schmitt, Michaela, Ingelfinger, Rebecca, Bischoff-Kont, Iris, Kopp, Larissa, Bode, Helge B., Schiffmann, Susanne and Fuerst, Robert: (2021) Xenocoumacin 2 reduces protein biosynthesis and inhibits inflammatory and angiogenesis-related processes in endothelial cells, Biomedicine & Pharmacotherapy, New York, NY, Elsevier Masson SAS, 140, August.

Cimen, Harun, Touray, Mustapha, Gulsen, Sebnem Hazal, Erincik, Omer, Wenski, Sebastian L., Bode, Helge B., Shapiro-Ilan, David and Hazir, Selcuk: (2021) Antifungal activity of different Xenorhabdus and Photorhabdus species against various fungal phytopathogens and identification of the antifungal compounds from X. szentirmaii, Applied Microbiology and Biotechnology, Heidelberg, Springer-Verlag, 105 (13), pp. 5517–5528.

Behsaz, Bahar, Bode, Edna, Gurevich, Alexey, Shi, Yan-Ni, Grundmann, Florian, Acharya, Deepa, Caraballo-Rodriguez, Andres Mauricio, Bouslimani, Amina, Panitchpakdi, Morgan, Linck, Annabell, Guan, Changhui, Oh, Julia, Dorrestein, Pieter C., Bode, Helge B., Pevzner, Pavel A. and Mohimani, Hosein: (2021) Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery (vol 12, 3225, 2021), Nature Communications, London, Nature Publishing Group, 12 (1).

Singh, Garima, Calchera, Anjuli, Schulz, Meike, Drechsler, Moritz, Bode, Helge B., Schmitt, Imke and Dal Grande, Francesco: (2021) Climate-specific biosynthetic gene clusters in populations of a lichen-forming fungus, Environmental Microbiology, Oxford, England, Blackwell Science, 23 (8), pp. 4260–4275.

Behsaz, Bahar, Bode, Edna, Gurevich, Alexey, Shi, Yan-Ni, Grundmann, Florian, Acharya, Deepa, Caraballo-Rodriguez, Andres Mauricio, Bouslimani, Amina, Panitchpakdi, Morgan, Linck, Annabell, Guan, Changhui, Oh, Julia, Dorrestein, Pieter C., Bode, Helge B., Pevzner, Pavel A. and Mohimani, Hosein: (2021) Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery, Nature Communications, London, Nature Publishing Group, 12 (1).

Incedayi, Gamze, Cimen, Harun, Ulug, Derya, Touray, Mustapha, Bode, Edna, Bode, Helge B., Yaylagul, Esra Orenlili, Hazir, Selcuk and Cakmak, Ibrahim: (2021) Relative potency of a novel acaricidal compound from Xenorhabdus, a bacterial genus mutualistically associated with entomopathogenic nematodes, Scientific Reports, London, UK, Nature Publishing Group, 11 (1).