Publications of Daniel Schindler

Koebel, T. S.; Palhares, R. M.; Fromm, C.; Szymanski, W. G.; Angelidou, G.; Glatter, T.; Georg, J.; Berghoff, B. A.; Schindler, D.: An easy-to-use plasmid toolset for efficient generation and benchmarking of synthetic small RNAs in bacteria. ACS Synthetic Biology 11 (9), pp. 2989 - 3003 (2022)

Ong, J. Y.; Swidah, R.; Monti, M.; Schindler, D.; Dai, J.; Cai, Y.: SCRaMbLE: A study of its robustness and challenges through enhancement of Hygromycin B resistance in a semi-synthetic yeast. Bioengineering 8 (3), 42 (2021)

Luo, Z.; Yu, K.; Xie, S.; Monti, M.; Schindler, D.; Fang, Y.; Zhao, S.; Liang, Z.; Jiang, S.; Luan, M. et al.; Xiao, C.; Cai, Y.; Dai, J.: Compacting a synthetic yeast chromosome arm. Genome Biology: Biology for the Post-Genomic Era 22 (1), 5 (2021)

Schindler, D.: Genetic Engineering and Synthetic Genomics in Yeast to Understand Life and Boost Biotechnology. Bioengineering-Basel 7 (4), pp. 137 - Article No.: 137 (2020)

Zhao, Y.; Yao, Z.; Ploessl, D.; Ghosh, S.; Monti, M.; Schindler, D.; Gao, M.; Cai, Y.; Qiao, M.; Yang, C. et al.; Cao, M.; Shao, Z.: Leveraging the Hermes Transposon to Accelerate the Development of Nonconventional Yeast-based Microbial Cell Factories. ACS SYNTHETIC BIOLOGY 9 (7), pp. 1736 - 1752 (2020)

Bruhn, M.; Schindler, D.; Kemter, F. S.; Wiley, M. R.; Chase, K.; Koroleva, G. I.; Palacios, G.; Sozhamannan, S.; Waldminghaus, T.: Functionality of Two Origins of Replication in Vibrio cholerae Strains With a Single Chromosome. FRONTIERS IN MICROBIOLOGY 9, 2932 (2018)

Schindler, D.; Dai, J.; Cai, Y.: Synthetic genomics: a new venture to dissect genome fundamentals and engineer new functions. CURRENT OPINION IN CHEMICAL BIOLOGY 46, pp. 56 - 62 (2018)

Schallopp, N.; Milbredt, S.; Sperlea, T.; Kemter, F. S.; Bruhn, M.; Schindler, D.; Waldminghaus, T.: Establishing a System for Testing Replication Inhibition of the Vibrio cholerae Secondary Chromosome in Escherichia coli. ANTIBIOTICS-BASEL 7 (1), 3 (2018)

Messerschmidt, S. J.; Schindler, D.; Zumkeller, C. M.; Kemter, F. S.; Schallopp, N.; Waldminghaus, T.: Optimization and characterization of the synthetic secondary chromosome synVicII in Escherichia coli. FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY 4, 96 (2016)

Schindler, D.; Milbredt, S.; Sperlea, T.; Waldminghaus, T.: Design and Assembly of DNA Sequence Libraries for Chromosomal Insertion in Bacteria Based on a Set of Modified MoClo Vectors. ACS SYNTHETIC BIOLOGY 5 (12), pp. 1362 - 1368 (2016)

Schindler, D.; Waldminghaus, T.: Synthetic chromosomes. FEMS MICROBIOLOGY REVIEWS 39 (6), pp. 871 - 891 (2015)

Messerschmidt, S. J.; Kemter, F. S.; Schindler, D.; Waldminghaus, T.: Synthetic secondary chromosomes in Escherichia coli based on the replication origin of chromosome II in Vibrio cholerae. SI 10 (2), pp. 302 - 314 (2015)

Schindler, D.; Nowrousian, M.: The polyketide synthase gene pks4 is essential for sexual development and regulates fruiting body morphology in Sordaria macrospora. FUNGAL GENETICS AND BIOLOGY 68, pp. 48 - 59 (2014)

Schindler, D.; Waldminghaus, T.: "Non-canonical protein-DNA interactions identified by ChIP are not artifacts": response. BMC GENOMICS 14, 638 (2013)

Gesing, S.; Schindler, D.; Nowrousian, M.: Suppression subtractive hybridization and comparative expression analysis to identify developmentally regulated genes in filamentous fungi. JOURNAL OF BASIC MICROBIOLOGY 53 (9), pp. 742 - 751 (2013)

Gesing, S.; Schindler, D.; Fraenzel, B.; Wolters, D.; Nowrousian, M.: The histone chaperone ASF1 is essential for sexual development in the filamentous fungus Sordaria macrospora. MOLECULAR MICROBIOLOGY 84 (4), pp. 748 - 765 (2012)

de Vries, S. T.; Kley, L.; Schindler, D.: Use of a Golden Gate plasmid set enabling scarless MoClo-compatible transcription unit assembly. In: Golden Gate Cloning. Methods in Molecular Biology, Vol. 2850, pp. 105 - 131 (Ed. Schindler, D.). Humana, New York, NY (2025)

Köbel, T. S.; Schindler, D.: Automation and miniaturization of Golden Gate DNA Assembly reactions using acoustic dispensers. In: Golden Gate Cloning. Methods in Molecular Biology, Vol. 2850, pp. 149 - 169 (Ed. Schindler, D.). Humana, New York, NY (2025)

Ramírez Rojas, A. A.; Brinkmann, C. K.; Schindler, D.: Validation of Golden Gate Assemblies using highly multiplexed nanopore amplicon sequencing. In: Golden Gate Cloning. Methods in Molecular Biology, Vol. 2850, pp. 171 - 196 (Ed. Schindler, D.). Humana, New York, NY (2025)

Zumkeller, C.; Schindler, D.; Felder, J.; Waldminghaus, T.: Modular Assembly of Synthetic Secondary Chromosomes. In: Bacterial Chromatin. Methods in Molecular Biology,, Vol. 2819, 2819 Ed., pp. 157 - 187 (Ed. Dame, R. T.). Humana, New York, NY (2024)